Plasmid | Product | System | Ind | Res | Source |
---|---|---|---|---|---|
pVS52 | CheZ-5G-YFP | pBAD33 | ara | cam | |
pVS149 | CheY-5G-mRFP1 | pTrc99a | IPTG | amp | |
pSJAB12 | CheZ-5G-YFP/CheY-5G-mRFP1 | PTrc99a | IPTG | amp | This work |
pSJAB106 | CheZ-5G-YFP/CheY-5G-mRFP1¶ | PTrc99a | IPTG | amp | This work |
pVS91 | CheB† | pTrc99a | ara | cam | |
pVS97 | CheB-D56E‡ | pBAD33 | ara | cam | |
pVS112 | CheBc§ | pBAD33 | ara | cam | V. Sourjik |
pSJAB 122 | CheBc-GS4G-mVenus | pBAD33 | ara | cam | This work |
pSJAB 123 | CheB(D56E)-GS4G-mVenus | pBAD33 | ara | cam | This work |
pSJAB 124 | CheB-GS4G-mVenus | pBAD33 | ara | cam | This work |
pZR 1 | FliC* | pKG116 | NaSal | cam | This work |
pPA114 Tsr | Tsr | pPA114 | NaSal | cam |
¶Contains a A206K mutation to enforce monomerity..
†expresses WT CheB.
‡carries a point mutation D56E in CheB.
§expresses only residues 147–349 of CheB, preceded by a start codon (Met).
*expresses sticky FliC filament (
Plasmid # | Plasmid name | Description | Bacterial selection | Reference |
---|---|---|---|---|
8 | pRS316 | pRS316, cen, Ura3 | Amp | |
10 | HA-Fzo1 on pRS316 | HA-Fzo1 on pRS316, Fzo1 prom, cen, Ura3 | Amp | |
14 | HA-Fzo1-K464R on pRS316 | HA-Fzo1K464R on pRS316, Fzo1 prom, cen, Ura3 | Amp | |
58 | YEplac181 | YEplac181, 2µ, Leu2 | Amp | |
59 | Ubp2-Flag on YEplac181 | Ubp2-Flag on YEplac181, Adh1 prom, 2µ, Leu2 | Amp | |
60 | Ubp2-C745S-Flag on YEplac181 | Ubp2C745S-Flag on YEplac181, Adh1 prom, 2µ, Leu2 | Amp | |
61 | Ubp12-Flag on YEplac181 | Ubp2-Flag on YEplac181, Adh1 prom, 2µ, Leu2 | Amp | |
62 | Ubp12-C372S-Flag on | Ubp2C372S-Flag on YEplac181, Adh1 prom, 2µ, Leu2 | Amp | |
63 | YEplac195 | YEplac195, 2µ, Ura3 | Amp | |
65 | Ubp12C372S on YEplac195 | Ubp12C372S (non-tagged) on YEplac195, 2µ, Ura3 | Amp | this study |
70 | mt-GFP on pYX142 | mt-GFP on pYX142, cen, Leu2 | Amp | |
75 | Cdc48 wt on pRS313 | Cdc48 wt on pRS313, cen, His3 | Amp | |
79 | pRS313 | pRS313, cen, His3 | Amp | |
150 | Cdc48-A547T on pRS313 | Cdc48A547T on pRS313, cen, His3 | Amp | this study |
341 | Ub on pKT10 | Ub on pK10, 2µ, Ura3 | Amp | |
342 | Ub-K48R on pKT10 | UbK48R on pK10, 2µ, Ura3 | Amp | |
343 | Ub-K63R on pKT10 | UbK63R on pK10, 2µ, Ura3 | Amp | |
344 | Ub-K48R,K63R on pKT10 | UbK48R,K63R on pK10, 2µ, Ura3 | Amp | |
356 | Myc-Ub on pRS426 | pCup1-Myc-Ub on pRS426, 2µ, Ura3 | Amp | |
375 | pRS426 | pRS426, 2µ, Ura3 | Amp |
Plasmid | Description | Source |
---|---|---|
pMQ30 | 7.5 kb mobilizable vector; oriT, sacB, GmR. | |
pAKN69 | Contains mini-Tn7(Gm)PA1/04/03::eyfp fusion. | |
pLD2722 | GmR, TetR flanked by Flp recombinase target (FRT) sites to resolve out resistance casettes. | this study |
pFLP2 | Site-specific excision vector with cI857-controlled FLP recombinase encoding sequence, sacB, ApR. | |
pLD1852 | ∆ | this study |
pLD1610 | ∆ | this study |
pLD1616 | ∆ | this study |
pLD1264 | ∆ | this study |
pLD1929 | ∆ | this study |
pLD2791 | ∆ | this study |
pLD1853 | Full genomic sequence of | this study |
pLD1966 | ∆ | this study |
pLD1967 | ∆ | this study |
pLD2044 | ∆ | this study |
pLD2777 | PCR-amplified | this study |
pLD2778 | PCR-amplified | this study |
pLD2779 | PCR-amplified | this study |
Plasmid | Description | Source or reference |
---|---|---|
YCplac111 | sc | ( |
YEplac181 | hc | ( |
YCplac22 | sc | ( |
p3390/pDSO9 | sc | ( |
p5633 | sc | This study |
p5635 | sc | This study |
p5638 | sc | This study |
p5637 | sc | This study |
p5640 | sc | This study |
p5642 | sc | This study |
p5644 | sc | This study |
pDH469 | sc | This study |
pDH468 | sc | This study |
pDH481 | sc | This study |
pDH471 | sc | This study |
pDH470 | sc | This study |
pDH473 | sc | This study |
pDH472 | sc | This study |
pDH475 | sc | This study |
pDH474 | sc | This study |
pDH478 | sc | This study |
pDH476 | sc | This study |
p3400/pDSO23 | hc | ( |
pPMB167 | hc | This study |
pPMB168 | hc | This study |
pPMB169 | hc | This study |
pPMB170 | hc | This study |
p4281/YCpTIF5-G31R-W | sc | ( |
p4280/YCpSUI3-S264Y-W | sc | ( |
p367 | sc | ( |
p391 | sc | ( |
p180 | sc | ( |
pPMB24 | sc | ( |
pPMB25 | sc | ( |
pPMB28 | sc | ( |
pC3502 | sc | ( |
pC4466 | sc | ( |
pC3503 | sc | ( |
pC3505 | sc | ( |
pTYB2-TIF11 | ( | |
p6013 | This study | |
p6015 | This study | |
pRaugFFuug | Dual luciferase reporter | ( |
pRaugFFuug | Dual luciferase reporter | ( |
Plasmid | Description | Reference or source |
---|---|---|
pFL38 | CEN-ARS (URA3) | ( |
pFL36 | CEN-ARS (LEU2) | ( |
p416 GAL1 | CEN-ARS GAL1p (URA3) | ( |
pJOD10 | p416 GAL1p-GAP1-GFP (URA3) | ( |
pCJ038 | p416 GAL1p -GAP1(K9R,K16R)-GFP (URA3) | ( |
pMA065 | p416 GAL1p -GAP1-126-GFP (URA3) | ( |
pMA091 | p416 GAL1p -GAP1-126-K9R,K16R-GFP (URA3) | ( |
pCH500 | CEN-ARS-GAP1 (URA3) | ( |
pHcGAP1 | YEp-HcGAP1 (URA3) | ( |
pES103 | YEp-HA-NPR1 (LEU2) | This study |
pAS103 | YEp-HA-NPR1 (URA3) | ( |
pCJ315 | CEN-ARS (LEU2-HIS3-LYS2) | Lab collection |
pMYC008 | YCp-AGP1p-LACZ (HIS3 TRP1 LEU2) | Lab collection |
pES154 | YCp-AGP1p-LACZ (HIS3 TRP1) | This study |
pHl-U | YEp-ADH1p-pHluorin (URA3) | ( |
pHl-I | YCp-loxP-kanMX-loxP-GPD1p-pHluorin (URA3) | ( |
pCJ366 | YEp (TRP1-LEU2-HIS3) | Lab collection |
pPS15-P1 | YCp-(Sc)PMA1 (LEU2) | ( |
pPMA4882ochre | YEp-PMA1p-(Np)PMA4882ochre (LEU2) | ( |
Plasmid | Relevant genotype/markers | Source |
---|---|---|
pGM074 | pKASBAR-kan ( | G. McVicker |
pSNAP-tag (T7)−2 | New England | |
pOB | pGEM3Zf(+) cloning vector containing the erythromycin resistance cassette (amp, ery) | ( |
pAISH | TetR derivative of pMUTIN4 | ( |
pKASBAR-EzrA-eYFP | pKASBAR-kan containing | This study |
pKASBAR-EzrA-meYFP | pKASBAR-kan containing | This study |
pKASBAR-EzrA-GFP | pKASBAR-kan containing | This study |
pKASBAR-EzrA-SNAP | pKASBAR-kan containing | This study |
pOB- | pOB containing the | This study |
pSS26b | pUC19 encoding | Covalys |
pSS26bFtsZ-C | pSS26b containing | This study |
pCQ11 | ( | |
pCQ11-FtsZ-SNAP | pCQ11 derivative containing | This study |
pCQ11-FtsZ-eYFP | pCQ11-FtsZ-SNAP with | This study |
Genes are human unless otherwise stated
Plasmid | Backbone | Insert | Ref |
---|---|---|---|
APX1-GFP1-10 | APX1 | super-folder GFP | This study |
CDV-hyPBase | pigg | ( | |
NES-EGFP-P4M × 1 | pEGFP-C1 | This study | |
FKBP-mCherry | pmCherry-N1 | This study | |
SAC1∆TMD-FKBP-mCherry | pmCherry-N1 | This study | |
SAC1C389S∆TMD-FKBP-mCherry | pmCherry-N1 | This study | |
iRFP-Sec61β | piRFP-C1 | iRFP: | This study |
mKO-ManII | pmKO-N1 | Kusabira Orange 2: | Tamas Balla |
mCherry-VAPB | pmCherry-C1 | mCherry: | This study |
mCherry-MAPPER | pmCherry-C1 | mCherry:MAPPER | ( |
EGFP-MAPPER | pEGFP-C1 | EGFP:MAPPER | ( |
GFP-ORP5 | pEGFP-C1 | EGFP: | ( |
GFP-E-Syt2 | pEGFP-C1 | EGFP: | ( |
EGFP-SAC1 | pEGFP-C1 | EGFP: | ( |
mEmerald-N16-Calreticulin | pmEmerald-N1 | mEmerald: | Michael Davidson (Addgene plasmid #54023) |
GFP-Sec61β | pAcGFP-C1-Sec61β | ( | |
EGFP-E-Syt1 | pEGFP-C1 | EGFP- | ( |
EGFP-STIM1 | pEGFP-C1 | ( | |
EGFP-Nir2 | pEGFP-N1 | EGFP: | ( |
EGFP-P4M × 2 | pEGFP-C1 | EGFP: | ( |
Lyn11-FRB-iRFP | piRFP-N1 | ( | |
mCherry-FKBP | pmCherry-C1 | mCherry: | ( |
mCherry-FKBP-SAC1 | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1C389S | pmCherry-C1 | mCherry: | This study |
mCherry-SAC1-FKBP | pmCherry-C1 | mCherry: | This study |
mCherry-SAC1C389S-FKBP | pmCherry-C1 | mCherry: | This study |
SAC1∆452-587-FKBP-mCherry | pmCherry-N1 | SACM1L(1-451): | This study |
mCherry-FKBP-SAC1∆TMD | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1-HLx2 | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1-HLx4 | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1-HLx6 | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1-HLx8 | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1-HLx10 | pmCherry-C1 | mCherry: | This study |
mCherry-FKBP-SAC1C389S-HLx8 | pmCherry-C1 | mCherry: | This study |
mCherry | pmCherry-C1 | mCherry | ( |
mCherry-SAC1 | pmCherry-C1 | mCherry: | ( |
mCherry-SAC1-HLx8 | pmCherry-C1 | mCherryL | This study |
mCherry-SAC1C389S-HLx8 | pmCherry-C1 | mCherry: | This study |
mTagBFP2-FKBP-CYB5Atail | pmTagBFP2-C1 | mTagBFP2: | This study |
Name | Description | Vector-Promoter | Addgene |
---|---|---|---|
P1 | HA-β2AR-NNES-NanoLuc-15aa linker-AsLOV2(V416L) | pAAV-CMV | 125224 |
P2 | gLuc sp-NanoLuc-HA-β2AR-NNES-AsLOV2(V416L) | pAAV-CMV | 125225 |
P3 | mCherry-GSGS linker-Zdk1 | pAAV-CMV | 125226 |
P4 | DRD1-NNES-eLOV-TEVcs-Flag-Gal4-V5 | pAAV-CMV | 125227 |
P5 | AVPR2-NNES-eLOV-TEVcs-Flag-Gal4-V5 | pAAV-CMV | 104844 |
P6 | β2AR-NNES-eLOV-TEVcs-Flag-Gal4-V5 | pAAV-CMV | 104841 |
P7 | NanoLuc-15aa linker-βarrestin2-HA-GS linker-TEVp | pAAV-CMV | 125228 |
P8 | UAS-Citrine | pAAV-UAS | 104839 |
P9 | βarrestin2-HA-GS linker-TEVp | pAAV-CMV | 104845 |
P10 | UAS-FLuc | pAAV-UAS | 104840 |
P11 | IgK sp-HA-CD4-10aa linker-CIBN-NNES-NanoLuc | pAAV-CMV | 125229 |
P12 | gLuc sp-NanoLuc-HA-oβ2AR-TS-eLOV-TEVcs-Flag-Gal4 | pLX208-CMV | 125230 |
P13 | NanoLuc-15aa linker-βarrestin2-HA-GS linker-TEVp | pLX208-CMV | 125231 |
P14 | UAS-Citrine | pFPGW-UAS | 125232 |
P15 | gLuc sp-NanoLuc-15aa linker-ICAM-Nrxn3b-HA | pLX208-CMV | 125233 |
P16 | gLuc sp-GS linker-HiBit-Flag-oβ2AR-TS-NNES-eLOV-TEVcs-Flag-Gal4-V5 | pAAV-CMV | 125234 |
P17 | NanoLuc-15aa linker-βarrestin2-no HA-GS linker-TEVp | pAAV-CMV | 125235 |
P18 | β2AR-NNES-NanoLuc-eLOV-TEVcs-Flag-Gal4-V5 | pAAV-CMV | 125236 |
Plasmid number | Genotype | Reference |
---|---|---|
pSMH145 | pLIC-Tra His6-TEV-Ctf3; His6-TEV-Mcm16; His6-TEV-Mcm22 | ( |
pSMH1269 | pFA6a- | This study |
pSMH1577 | pFA6a- | This study |
Protein complex | Plasmid name | Names used in this paper | Proteins expressed* | Vector | References |
---|---|---|---|---|---|
Mif2 | Sc_Mf_7 | Mif2 | Mif2-linker-(27-392)MBP-6XHis** | pLIC | This study |
pGH52 | Mif2 | Mif2-linker-(27-392)MBP** | pLIC | This study | |
Sc_Mf_5B | ΔN-Mif2 | (41-549)Mif2-linker-(27-392)MBP | pLIC | This study | |
OA | pGH3 | OA | Ame1-6XHis, Okp1 | pST39 | This study |
pGH4 | OA | Ame1-FLAG, Okp1 | pST39 | This study | |
pGH42 | ΔN-OA | (21-324)Ame1-FLAG, Okp1 | pST39 | This study | |
pGH15 | ΔN-OA | (21-324)Ame1-6XHis, Okp1 | pST39 | This study | |
MIND | pGH63 | 2D-MIND | 6XHis-linker-Nsl1, S240D, S250D-Dsn1, Mtw1, Nnf1 | pST39 | This study |
pGH62 | 2D-MIND | FLAG-Nsl1, S240D, S250D-Dsn1, Mtw1, Nnf1 | pST39 | This study | |
pGH46 | MIND | Nsl1, FLAG-Dsn1, Mtw1, Nnf1 | pST39 | This study | |
Ndc80c | pJT048 | Part of Ndc80c | Spc24-Flag, Spc25 | pRSFDuet | |
pEM033 | Part of Ndc80c | Spc24-6XHis, Spc25 | pRSFDuet | ||
Ndc80/Nuf2 | Part of Ndc80c | Nuf2, Ndc80 | pETDuet | ||
Dam1c | pJT044 | Dam1c | Dad1, Duo1, Spc34-FLAG, Dam1, Hsk3 and | pST39 | |
CI | pGH58 | CI | FLAG-Chl4, Iml3 | pLIC | This study |
Histones | pScKl2 | Cse4-NCP | pLIC | ||
pScKl4 | H3-NCP | H3, 6XHis-H2A, H2B. | pLIC | ||
pScHT4 | Cse4(1-50) | 6XHis-MBP-(1-50)Cse4 | pLIC | This study |